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1 Dairy and Swine Research and Development Centre, Agriculture and Agri-Food Canada, Lennoxville, QC, Canada J1M 1Z3
2 National Agricultural Research Center for Hokkaido Region, Hitsujigaoka 1, Toyohiraku, Sapporo, Japan 0628555
Corresponding author: C. Y. Lin; e-mail: clin{at}uoguelph.ca.
| ABSTRACT |
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Key Words: lactation curve persistency restricted index
Abbreviation key: EBVL = lactation EBV, TD = test-day.
| INTRODUCTION |
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Macciotta et al. (2004) applied multivariate factor analysis of the correlation matrix of test-day (TD) records to derive 2 index scores, that were related to the rate of ascent to the lactation peak and the rate of decline after the peak (i.e., persistency). Genetic modification of the lactation curves concerns the artificial redistribution of total lactation responses among different days or stages of the lactation. Togashi and Lin (2003) presented 2 equivalent selection procedures for simultaneous improvement of lactation milk and persistency: 1) index selection based on stage EBV, and 2) index selection based on random regression coefficients of the TD model. However, development of these 2 indices requires an a priori assumption of the lactation response and subjective distribution of genetic gains among different stages of the lactation. The purpose of this study was to compare different selection strategies for improving lactation milk yield without decreasing persistency and without requiring a priori assumption of the lactation response.
| MATERIALS AND METHODS |
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![]() | ([1]) |
where
is a column vector containing the daily EBV from t = DIM 1 to 305 and 1 is a unit column vector of order 305. The lactation response to current selection on lactation EBV (EBVL) is the sum of daily genetic gains (
Gt) from DIM 1 to 305:
![]() |
where
,
is selection intensity, and G is a (305 x 305) genetic covariance matrix on a daily basis.
In this study, persistency (P) is defined as P = EBV280/EBV60. Single-trait selection for this criterion was reported to improve both lactational milk yield and persistency (Togashi and Lin, 2004). The criterion EBVL places equal weightings among daily EBV of the lactation, regardless of differences among daily EBV (Olori et al., 1998; Pool and Meuwissen, 2001). Selection based on EBVL tends to improve the lactation milk yield at the expense of persistency (Togashi and Lin, 2004). Thus, it is desirable to find optimal weightings for each daily EBV of the lactation to improve milk production without decreasing persistency.
General Development of Restricted Index for Modification of the Lactation Curve
Genetic modification of the lactation curve inherently implies the redistribution of the selection responses among different days or stages of the lactation. The treatment of each TD yield of the lactation as a separate trait makes it possible to combine these TD yields into an index to modify the lactation curve. The principle of the restricted selection index (Kempthorne and Nordskog, 1959) can be extended to alter the genetic response pattern of the lactation curve by maximizing the total lactational response in milk yield, subject to restricting the genetic gains at certain DIM.
Let the breeding goal be to maximize the lactation response subject to the restriction of genetic gains in certain days of the lactation curve. The restricted index (I) is the sum of weighted daily EBV from t = DIM 1 to 305.
![]() | ([2]) |
where
is a (305 x 1) column vector containing daily EBV ranging from DIM 1 to 305, and b is (305 x 1) column vector of index weights corresponding to
. The net merit (H) of the whole lactation to be maximized is the sum of daily genetic values from DIM 1 to 305:
![]() | ([3]) |
where g is a column vector of daily genetic values (gt) ranging from t = DIM 1 to 305. It follows from [2] and [3] that
2I = b'Gb,
2H = 1'G1, and
IH = b'G1.
Let r be the number of TD yields restricted. The breeding goal is to maximize the lactation response [i.e., minimize E(I H)2] subject to the restriction of
![]() |
where k is a (r x 1) column vector of values (negative, zero, or positive) determined by the intended restrictions (zero, proportional, or both),
is an unknown constant to be determined a posteriori, and D is a (305 x r) matrix containing the columns of G corresponding to the restricted DIM. The method of Lagrange multipliers gives,
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where
is a (r x 1) vector of Lagrange multipliers. Differentiating the function f with respect to b,
, and
, and setting the partial derivatives equal to zero lead to the following set of equations:
![]() | ([4]) |
The solution to equation [4] is,
![]() | ([5]) |
It can be shown that
2I and
H = 
1. Expression [4] or [5] is a generalized form for constructing a restricted index to achieve maximum lactation response and manipulate daily genetic changes of the lactation curve at the same time. The presented procedure optimized the linear combination of the unrestricted BLUP subject to restrictions, whereas Quaas and Henderson (1976) imposed restrictions directly on the multitrait MME to obtain the restricted BLUP.
Maximizing Lactation Milk Yield While Maintaining Persistency at a Constant Level
The persistency measure EBV280 / EBV60 indicates that the genetic responses at DIM 60 and 280 must increase at the same rate (
G60 =
G280) to achieve constant persistency. Restriction of
G60 =
G280 is the same as imposing (G60 ' G280 ' )b = 0, where G60 and G280 refer to the 60th and 280th columns of G, respectively. Maximizing lactation response while maintaining a constant persistency is equivalent to minimizing E(I H)2 subject to the restriction (G60 ' G280 ' )b = 0. The desired index can be obtained from equation [5] by setting k = 0 and D' = (G60 ' G280 '):
![]() | ([6]) |
Maximizing Lactation Milk Yield While Holding the Peak Yield Constant
To maximize lactation response and hold the peak yield constant at the same time is equivalent to minimizing E(I H)2 subject to the restriction G60 ' b = 0. The desired index that satisfies this restriction can be obtained from equation [5] by setting k = 0 and D' = G'60 :
![]() | ([7]) |
Improvement of Lactation Milk Without Altering the Lactation Curve
When the lactation curve is optimal, the breeding goal is to raise the level of production without changing the lactation curve. This would require the imposition of equal genetic gains on each day of the entire lactation curve (
G1 =
G2 = =
G305), which can be rewritten as a proportional restriction of
G1:
G2: :
G305 = 1:1: :1. The number of TD yields restricted is r = 305 in this case. The index designed to fulfill this goal can be obtained by specifying k = 1 and D = G in formula [5]. This leads to b = (1'1/1'G 11)G 11, which further reduces to b = G 11 as the scalar (1'1/1'G 11) can be dropped.
Finally, the index designed to move the lactation curve upward without altering its shape is Id =
'G 11, which takes the same form as the desired gains index of Pesek and Baker (1969). Let
be a (305 x 1) vector of genetic responses for each DIM of the lactation. The desired gains index Id gives
= G'b(
/
I) = G'G 11(
/
I) = 1(
/
I), thus achieving equal genetic gains for each DIM across the lactation, and a total lactation response of 305
/
I when summed across 305 DIM.
Unweighted Linear Index for Improving Lactation EBV and Persistency
Lactation EBV and persistency were linearly combined as follows:
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where µ60 and µ280 are the means of EBV at DIM 60 and 280, respectively.
The persistency EBV280/EBV60 was linearly approximated according to the Taylor series expansion (Mood et al., 1987). Because µ280/µ60 is a constant and can be dropped, the unweighted linear index (Iu) becomes,
![]() | ([8]) |
with variance
![]() |
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and the genetic responses for the 2 index traits are
* = G*b(
/
Iu).
Weighted Linear Index for Improving EBVL and Persistency
Because of the large difference in variation between EBVL and persistency (P), these 2 index traits were weighted by the inverse of their standard deviations (SD) as follows:
![]() |
where
![]() |
It follows that
L
PIw =
P EBVL +
LP. Because
L
P are constants and can be dropped, this expression can be simplified further to Iw =
P EBVL +
LP. When P is linearly approximated, the weighted linear index Iw becomes,
![]() | ([9]) |
Selection Strategies Compared
Pool et al. (2000) fitted a random regression model with Legendre polynomials of order 4 (5 genetic random regression coefficients per animal) to estimate the genetic covariance matrix (G) for first-lactation TD records of Dutch Holstein-Friesian cows. The estimates of their genetic covariance matrix and correlations are given in Table 1
. This G matrix was used to compare the 6 selection strategies: 1) IR1, designed to maximize lactation response subject to the restriction of
G60 =
G280 (i.e., constant persistency), based on formula [6]; 2) IR2, designed to maximize the lactation response subject to the restriction of
G60 = 0, based on formula [7]; 3) the desired gains index Id =
'G 11, designed to raise the overall production level without altering the lactation curve; 4) an unweighted linear index Iu based on formula [8], designed to improve lactation milk and persistency simultaneously; 5) a weighted linear index Iw based on formula [9], designed with the same purpose as Iu; and 6) conventional selection based on EBVL, which was used for comparison.
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| RESULTS AND DISCUSSION |
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= 1). The rate of decline (ß) in the lactation curve from DIM 60 to 280 is defined as ß = (
G60
G280)/220, which is the average of daily genetic gains during the 220 d of lactation between DIM 60 and 280. By this definition, persistency decreases when ß is positive, improves when ß is negative, and remains constant when ß is zero. As ß increases, the lactation curve between DIM 60 and 280 declines more steeply and persistency decreases. Therefore, the magnitude and sign of ß provides an objective way to compare genetic changes in persistency.
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Restricted Indices
Table 2
shows that index IR1, subject to the constraint of
G60 =
G280, achieved constant persistency (ß = 0) as intended, while producing a slightly smaller response in lactation milk (669 kg EBV) than conventional selection on EBVL (672 kg EBV). This result suggests that IR1 is a realistic strategy for improving lactation milk while holding persistency constant. Index IR2, designed to maximize lactation milk while holding peak production constant (
G60 = 0), achieved the greatest persistency (ß = 5.69) but the smallest response in lactation milk (120 kg EBV) among the 6 selection strategies compared (Table 2
). In fact, Ferris et al. (1985) had previously reported that decreasing peak yield to improve persistency would decrease milk yield greatly. The sharp decrease in lactational response to selection on IR2 occurs because the genetic correlations among daily yields around the peak period or in midlactation are highly positive (Table 1
). Suppressing daily yields around the peak period would also suppress daily yields for the other DIM. Thus, it is not practical to inhibit daily yields around the peak period to increase persistency, although it might be better for the cow in terms of stress and disease resistance. The desired gains index Id, designed to maintain the same lactation curve before and after selection, achieved a lactation response of 560 kg EBV and produced a lactation curve parallel to the original one. Although IR1 and Id realized the same goal of constant persistency (ß = 0), IR1 yielded a greater response in lactation milk (669 kg EBV) than Id (560 kg EBV). Index IR1 imposed a restriction on DIM 60 and 280 only (i.e., restriction on 2 traits), whereas Id placed constraints on each day of the entire lactation (restriction on 305 traits), such that Id is subject to a greater restriction than IR1. As expected, the more severe the level of the restriction, the smaller the lactation response. Therefore, selection on IR1 is preferred over the desired gains index Id for improving lactation milk without decreasing persistency.
Unrestricted Linear Indices
The unweighted linear index Iu showed the same lactation response (672 kg EBV) as conventional selection on EBVL and carried the same decreased persistency (ß = 1.06) (Table 2
), indicating that including the persistency ratio in index Iu had no impact on the rankings of animals by index Iu. This lack of impact occurred because the variance of EBVL (451,140 kg2) overwhelmed the variance of the ratio EBV280/EBV60 (1.44 kg2), so that EBVL played the dominant role in determining the index values of Iu.
Use of the weighted linear index Iw resulted in a response in lactational milk yield of 509 kg EBV and achieved the second (after IR2) largest increase in persistency (ß = 4.34). The difference in response pattern between the unweighted Iu and the weighted Iw emphasizes the importance of weighting the EBV of different traits by the inverses of their standard deviations in index construction when large differences in variances exist. In addition, lactational yield and persistency were considered equally important economically in this study. For eventual applications, the relative economic importance of lactational yield and persistency must be considered in index construction. Information on relative economic weights between lactation milk and persistency is lacking in the literature. Proper determination of reasonable economic weights between these 2 traits is important so that selection strategies can be compared based on net merit (
H).
The modification of the lactation curves inherently implies the imposition of different restrictions on different days or parts of the lactation curve. The system of equations [4] developed in this study provides a generalized framework to maximize lactation milk yield while imposing different restrictions on particular DIM of the lactation period, without assuming prior knowledge of lactation genetic gains. In contrast, the study of Togashi and Lin (2003) required a priori assumption of lactation response and a subjective distribution of genetic gains among different stages of the lactation to modify the lactation curve for increased milk yield and persistency. Because selection intensity, selection goal, and environmental factors may change over time, the prespecified lactation response based on historical data could vary. Therefore, prior assumption of the realized lactation response to construct an index would not necessarily guarantee maximum improvement of lactation milk yield. This study treats each daily EBV of the lactation as an individual trait of the index compared with treating the EBV of each stage as a separate trait of the index (Togashi and Lin, 2003). Apparently, the present study has a better control of genetic change at each DIM of the lactation and offers an objective means of modifying the lactation curve without prior assumption of total lactation response and without subjective redistribution of genetic gains among different stages of the lactation.
| CONCLUSIONS |
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| FOOTNOTES |
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Received for publication November 30, 2004. Accepted for publication March 3, 2005.
| REFERENCES |
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This article has been cited by other articles:
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K. Togashi and C. Y. Lin Genetic Modification of the Lactation Curve by Bending the Eigenvectors of the Additive Genetic Random Regression Coefficient Matrix J Dairy Sci, December 1, 2007; 90(12): 5753 - 5758. [Abstract] [Full Text] [PDF] |
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K. Togashi and C. Y. Lin Selection for Milk Production and Persistency Using Eigenvectors of the Random Regression Coefficient Matrix J Dairy Sci, December 1, 2006; 89(12): 4866 - 4873. [Abstract] [Full Text] [PDF] |
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