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Journal of Dairy Science Vol. 83 No. 5 1125-1134
© 2000 by American Dairy Science Association ®
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Strategies for Estimating the Parameters Needed for Different Test-Day Models

I. Misztal 1, T. Strabel 1, J. Jamrozik 2, E. A. Mäntysaari 3, and T.H.E. Meuwissen 4

1 Department of Animal and Dairy Science University of Georgia, Athens 30602
2 Centre for Genetic Improvement of Livestock, Department of Animal and Poultry Science, University of Guelph, Guelph, ON, Canada, N1G 2W1
3 Institute of Animal Production, Agricultural Research Centre MTT, FIN-31600 Jokioinen, Finland
4 Department of Animal Breeding and Genetics, DLO Institute for Animal Science and Health (ID-DLO), 8200 AB Lelystad, The Netherlands

Currently, most analyses of parameters in test-day models involve two types of models: random regression, where various functions describe variability of (co)variances with regard to days in milk, and multiple traits, where observations in adjacent days in milk are treated as one trait. The methodologies used for estimation of parameters included Bayesian via Gibbs sampling, and REML in the form of derivative-free, expectation-mazimization, or average-information algorithms. The first method is simpler and uses less memory but may need many rounds to produce posterior samples. In REML, however, the stopping point is well established. Because of computing limitations, the largest estimations of parameters were on fewer than 20,000 animals. The magnitude and pattern of heritabilities varied widely, which could be caused by simplifications in the model, overparameterization, small sample size, and unrepresentative samples. Patterns of heritability differ among random regression and multiple-trait models. Accurate parameters for large multi-trait random regression models may be difficult to obtain at the present time. Parameters that are sufficiently accurate in practice may be obtained outside the complete prediction model by a constructive approach, where parameters averaged over the lactation would be combined with several typical curves for (co)variances for days in milk. Obtained parameters could be used for any model, and could also aid in comparison of models.

Key Words: genetic parameters • test-day models • dairy cattle

Submitted on August 9, 1999
Accepted on November 23, 1999




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